Shieh Lab
   
 

    

 

BGVM

 
 
Readme
how to run BGVM code

BGVM code
test for symmetry (test_for_symmetry.R)
rose diagrams (rose_diagrams.m, and angle.txt)
MLE and LR-test (MLE_LR-test.R)
rpg (rpg.zip)
Code for preprocessing BGVM
(BGVM_preprocessing_applications.zip)
.ptt.dat files for 1638 prokaryotic genomes (BGVM_all_ptt_dat.zip)


Supplementary
rose diagrams of 13 Mycoplasma bacteria
fitted_GVMs
QQ-plots: (1, 2)_1 , (1, 2)_2 , (2, 3)_2 , (2, 3)_3 , (3, 4)_3 ,
(3, 4)_4 , (4, 5)_4 , (4, 5)_5 , (5, 6)_5 , (5, 6)_6 , (6, 7)_6 ,
(6, 7)_7 , (7, 8)_7 , (7, 8)_8 , (8, 9)_8 , (8, 9)_9
     
 
  Institute of Statistical Science, Academia Sinica, 128, Academia Rd. Sec. 2, Taipei 115, Taiwan